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32 unanswered issues
Remove Extra Partial Correlations Options
high
bug
in progress
partial correlations
opened 6 weeks ago by Frederick Muriuki Muriithi, last updated 31 hours ago by Frederick Muriuki Muriithi
Fix some display issue with the Correlation Results table (plus add column resizing)
correlation
datatables
javascript
in progress
bug
feature-enhancement
medium
opened 6 weeks ago by zsloan
Uninformative error when batch submitting unknown strains
medium
unclear
metatadata
opened 7 weeks ago by BonfaceKilz
Case Attribute Editing Problems
high
in progress
bug
metadata
case-attributes
opened 8 weeks ago by zsloan, last updated 8 weeks ago by zsloan
Cannot Edit Metadata of BXD Traits Effectively
high
in progress
metatadata
opened 8 weeks ago by BonfaceKilz, last updated 4 weeks ago by BonfaceKilz
Implementing parallel correlation with rust
correlation
rust
parralel
in progress
medium
upgrade
opened 9 weeks ago by Alexander Kabui, last updated 9 days ago by Alexander Kabui; 4 of 7 tasks done
Make Partial Correlations Table Searchable
partial correlations
datatables
pending
migration
feature-request
medium
opened 9 weeks ago by Frederick Muriuki Muriithi
Render images in tissue web output
tissue
feature request
opened 9 weeks ago by Arun Isaac
Create a new UI language for gn2
low
unclear
ui
opened 10 weeks ago by BonfaceKilz
Remove externally loaded JS
guix
medium
unclear
ui
enhancement
opened 10 weeks ago by BonfaceKilz
Cool Interfaces We Should Emulate
low
stalled
ui
opened 2 months ago by BonfaceKilz, last updated 2 months ago by BonfaceKilz
Rewrite qc and qc-uploads in Python3
quality control
in progress
high
rewrite
opened 2 months ago by Frederick Muriuki Muriithi, last updated 31 hours ago by Frederick Muriuki Muriithi
Fix Case Attribute Work (Consecutive CRUD applications)
case attributes
data editing
bug
in progress
opened 3 months ago by BonfaceKilz, last updated 2 months ago by BonfaceKilz; 0 of 2 tasks done
Editing Metadata [Improvements to Make]
metadata
phenotypes
in progress
medium
ui
opened 3 months ago by BonfaceKilz, last updated 3 months ago by BonfaceKilz
Add a transient interface for tissue
under discussion
low
linter
tissue
feature-request
opened 3 months ago by BonfaceKilz
Error when attempt to zoom to a chromosome after mapping a PCA trait
pca
from github
high priority
unclear
high
bug
opened 3 months ago by Frederick Muriuki Muriithi
Multi-trait heat map failed
heatmap
from github
stalled
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi
Search results for SNP looks weird
ui
snp
from github
in progress
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi
Unable to open new tab for mapping/ correlations with Chrome
mapping
correlation
google chrome
ui
from github
medium
unclear
bug
opened 3 months ago by Frederick Muriuki Muriithi
Integrate Feed Analyser
twitter
feed analyser
from github
medium
in progress
feature-request
opened 3 months ago by Frederick Muriuki Muriithi
Global search does not close connections properly (and is slow)
global search
db connections
medium priority
from github
stalled
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi
Slow query
slow query
from github
stalled
high
opened 3 months ago by Frederick Muriuki Muriithi
GN1 annotation page broken
gn1
genenetwork1
annotation
from github
bug
overdue
high
opened 3 months ago by Frederick Muriuki Muriithi
Add search, select and export to datatables table
datatables
ui
low priority
unclear
feature-request
low
opened 3 months ago by Frederick Muriuki Muriithi
Capture Data on the BXDs in RDF
rdf
bxd
rest
from github
high priority
feature-request
enhancement
unclear
high
opened 3 months ago by Frederick Muriuki Muriithi
Capture state of phenotypes in a HASH
phenotypes
rest
ui
medium
in progress
enhancement
feature-request
opened 3 months ago by Frederick Muriuki Muriithi
Fetch trait names for phenotypes
phenotype
from github
feature-request
enhancement
unclear
pending
opened 3 months ago by Frederick Muriuki Muriithi
Variant Browser seems to be using mm9
variant browser
mm9
from github
stalled
bug
unclear
opened 3 months ago by Frederick Muriuki Muriithi
csv export meta data are not commented out
csv
from github
meta data
unclear
bug
high
opened 3 months ago by Frederick Muriuki Muriithi
Global search does not return results
global search
from github
unclear
bug
critical
opened 3 months ago by Frederick Muriuki Muriithi
Gn3 network dependency
medium
in progress
bug
network_connections
ctl
wgcna
opened 3 months ago by Alexander Kabui, last updated 3 months ago by Alexander Kabui
Gene Symbol Mappings
in progress
opened 7 months ago by jgart
56 forgotten issues
Error when attempt to zoom to a chromosome after mapping a PCA trait
pca
from github
high priority
unclear
high
bug
opened 3 months ago by Frederick Muriuki Muriithi
Multi-trait heat map failed
heatmap
from github
stalled
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi
Search results for SNP looks weird
ui
snp
from github
in progress
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi
Unable to open new tab for mapping/ correlations with Chrome
mapping
correlation
google chrome
ui
from github
medium
unclear
bug
opened 3 months ago by Frederick Muriuki Muriithi
Integrate Feed Analyser
twitter
feed analyser
from github
medium
in progress
feature-request
opened 3 months ago by Frederick Muriuki Muriithi
Global search does not close connections properly (and is slow)
global search
db connections
medium priority
from github
stalled
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi
Slow query
slow query
from github
stalled
high
opened 3 months ago by Frederick Muriuki Muriithi
GN1 annotation page broken
gn1
genenetwork1
annotation
from github
bug
overdue
high
opened 3 months ago by Frederick Muriuki Muriithi
Add search, select and export to datatables table
datatables
ui
low priority
unclear
feature-request
low
opened 3 months ago by Frederick Muriuki Muriithi
Capture Data on the BXDs in RDF
rdf
bxd
rest
from github
high priority
feature-request
enhancement
unclear
high
opened 3 months ago by Frederick Muriuki Muriithi
Capture state of phenotypes in a HASH
phenotypes
rest
ui
medium
in progress
enhancement
feature-request
opened 3 months ago by Frederick Muriuki Muriithi
Fetch trait names for phenotypes
phenotype
from github
feature-request
enhancement
unclear
pending
opened 3 months ago by Frederick Muriuki Muriithi
Variant Browser seems to be using mm9
variant browser
mm9
from github
stalled
bug
unclear
opened 3 months ago by Frederick Muriuki Muriithi
csv export meta data are not commented out
csv
from github
meta data
unclear
bug
high
opened 3 months ago by Frederick Muriuki Muriithi
Global search does not return results
global search
from github
unclear
bug
critical
opened 3 months ago by Frederick Muriuki Muriithi
Gn3 network dependency
medium
in progress
bug
network_connections
ctl
wgcna
opened 3 months ago by Alexander Kabui, last updated 3 months ago by Alexander Kabui
Need Guix packages
guix
packages
environments
medium
unclear
bug
opened 3 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
Large datasets crash gemma
gemma
crash
high
bug
unclear
opened 3 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi; 0 of 7 tasks done
Resurrect Mechanical Rob
medium
enhancement
in progress
testing
ci
cd
mechanical rob
opened 4 months ago by Arun Isaac, last updated 3 months ago by Frederick Muriuki Muriithi
Document API endpoints for GeneNetwork3
gn3
documentation
opened 4 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Databases Getting Out of Wack
database
gemma
reaper
unclear
bug
high
opened 4 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Guix: Using guix shell with root file
guix
guix shell
root file
low
unclear
opened 5 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
R Kernel Dying
r
unclear
high
bug
opened 5 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Arthur mentioned last meet that GeneNetwork2 does not redirect http urls to https.
gn2
http
https
unclear
medium
bug
opened 7 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Handle Configuration Files
gn2
configuration
deploy
in progress
medium
bug
opened 7 months ago by BonfaceKilz, last updated 3 months ago by Frederick Muriuki Muriithi
Document redis data
documentation
data
redis
unclear
high
bug
opened 7 months ago by BonfaceKilz, last updated 3 months ago by Frederick Muriuki Muriithi
GN1 symbols
gn1
symbols
unclear
medium
bug
opened 7 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi; 0 of 2 tasks done
Gene Symbol Mappings
in progress
opened 7 months ago by jgart
Enumerating all QC checks
quality control
high
feature-request
in progress
opened 7 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Global search problems
global search
brca2
bug
critical
unclear
opened 7 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi; 0 of 2 tasks done
Genewiki conversion
gn1
documentation
unclear
medium
enhancement
opened 7 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
Add configuration to set server name
binderlite
notebooks
configuration
high
unclear
feature-request
opened 8 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Each shepherd service needs its own guix profile.
shepherd
system administration
high
unclear
bug
opened 8 months ago by Efraim Flashner, last updated 3 months ago by Frederick Muriuki Muriithi
ansi2html terminal user feedback
binderlite
notebooks
ansi2html
medium
feature-request
ongoing
in progress
opened 8 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Integrate styling of app with GN2
binderlite
notebooks
styling
ui
medium
bug
ongoing
in progress
opened 8 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Return canned text if notebook description returns none
binderlite
notebooks
in progress
high
bug
opened 8 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Add convenience templates
tissue
gnbug
in progress
discussion
stalled
low
feature-request
opened 8 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Proxy has hard coded URLs
proxy
configuration
settings
unclear
medium
bug
opened 8 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
When binderlite finds an unkown package in a guix manifest
high
binderlite
notebooks
unclear
bug
opened 9 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Add Regular Expression to Prevent Invalid Input
high
binderlite
notebooks
unclear
bug
opened 9 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Tux01 hard disk crash
in progress
medium
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
A linter for gnbug
under discussion
low
gnbug
linter
tissue
feature-request
opened 9 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Show Template for when Git URL is not Found
binderlite
template
medium
bug
opened 9 months ago by jgart, last updated 3 months ago by Frederick Muriuki Muriithi
Marker covariates implemented wrong in rqtl_wrapper.R
medium
marker covariates
in progress
halted
bug
opened 9 months ago by zsloan, last updated 3 months ago by Frederick Muriuki Muriithi
Medaka Inbred Kiyosu-Karlsruhe (MIKK) Panel
medaka
mikk
unclear
data
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
404 error in logs
low
unclear
deployment
404
enhancement
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
GN1 Slowness
gn1
high
bug
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
Marker mapping
marker
unclear
high
bug
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
GN1 Pairscan
unclear
missing dependency
binary blob
gn1
critical
bug
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
Fix GN1 Network Graph
in progress
gn1
network graph
high
bug
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
GN1 Production
in progress
gn1
critical
bug
opened 9 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi; 3 of 8 tasks done
Multivariate GEMMA hangs (issue 243)
high
unclear
gemma
failure
opened 10 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
Using guix-bioinformatics in a channels.scm file
medium
unclear
guix-bioinformatics
bug
opened 10 months ago by Efraim Flashner, last updated 3 months ago by Frederick Muriuki Muriithi
genecup is currently running as root on penguin2.
high
unclear
genecup
penguin2
failure
opened 10 months ago by Efraim Flashner, last updated 3 months ago by Frederick Muriuki Muriithi
Clean up Authorisation
medium
in progress
stalled
authorisation
opened 11 months ago by BonfaceKilz, last updated 3 months ago by Frederick Muriuki Muriithi
Hanging database
high
unclear
database
bug
opened 11 months ago by Pjotr Prins, last updated 3 months ago by Frederick Muriuki Muriithi
10 active issues
Scree Plot appears to be incorrect
correlations
pca
scree-plot
in-progress
medium
bug
opened 5 weeks ago by zsloan, last updated 9 days ago by BonfaceKilz
Effect size for GEMMA is a MUST
opened 10 weeks ago by Rob Williams, last updated 8 weeks ago by Arun Isaac
Zoomed mapping result are empty for certain traits
high
in progress
bug
opened 2 months ago by zsloan, last updated 2 months ago by zsloan
Miscellaneous UI issues
low
in-progress
user-interface
ui
opened 3 months ago by zsloan, last updated 4 days ago by BonfaceKilz
MySQLdb._exceptions.OperationalError: (1040, 'Too many connections')
mysql
database
bug
opened 3 months ago by BonfaceKilz, last updated 2 months ago by Frederick Muriuki Muriithi; 0 of 2 tasks done
Automatically find broken links on GN2
gn1
gn2
broken links
from github
completed
medium
bug
opened 3 months ago by Frederick Muriuki Muriithi, last updated 2 months ago by Alexander Kabui; 2 of 2 tasks done
Adding principal component to collection returns an error
collections
from github
bug
high
unclear
opened 3 months ago by Frederick Muriuki Muriithi, last updated 3 months ago by Alexander Kabui
'TempDataSet' object has no attribute 'query_for_group' (error)
tempdataset
from github
unclear
bug
high
opened 3 months ago by Frederick Muriuki Muriithi, last updated 4 days ago by BonfaceKilz
Slow Correlations and UI crashes
in progress
correlations
ui
crash
critical
bug
opened 9 months ago by BonfaceKilz, last updated 2 months ago by Alexander Kabui
Correlations time out
critical
in progress
bug
correlations
time out
opened 11 months ago by Pjotr Prins, last updated 2 months ago by Pjotr Prins; 2 of 3 tasks done
29 closed issues
(made with
skribilo
)