- Hanging database
issue opened on Dec 21 2021 by Pjotr Prins, last updated 17 hours ago by Pjotr Prins
- CLI Script to Generate Text Files
issue opened 6 weeks ago by Frederick Muriuki Muriithi, last updated 5 days ago by Alexander_Kabui
- Add option to directly link to mapping results
issue opened 9 days ago by Zachary Sloan
- Big File Upload Fails
issue opened 11 days ago by Frederick Muriuki Muriithi
- List of proposed changes for PCA traits/figures in Correlation Matrix page
issue opened 3 weeks ago by Zachary Sloan
- GN1 annotation page broken
issue opened 5 weeks ago by Pjotr Prins
- Correlation results wrong for certain traits/datasets
issue opened 7 weeks ago by Zachary Sloan, last updated 5 weeks ago by Zachary Sloan
- Migrate User Accounts from Redis to new Auth DB
issue opened 5 weeks ago by Frederick Muriuki Muriithi
- Build Registration Page for OAuth2 Clients
issue opened 5 weeks ago by Frederick Muriuki Muriithi
- GN1 github problem
issue opened 6 weeks ago by Pjotr Prins
- GN1 annotation page broken
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated 6 weeks ago by Pjotr Prins; 0 of 2 tasks done
- Dump sample data to LMDB
issue opened 6 weeks ago by Munyoki Kilyungi; 1 of 4 tasks done
- Add Sample Size to RDF
issue opened 6 weeks ago by Munyoki Kilyungi
- Fix Broken UTF-8 characters in our Database
issue opened on Nov 29 2022 by Munyoki Kilyungi, last updated 6 weeks ago by Munyoki Kilyungi
- Tux02 Production
issue opened on Oct 07 2021 by Pjotr Prins, last updated 6 weeks ago by Pjotr Prins; 17 of 22 tasks done
- Add LICENSE page to GN2
issue opened 7 weeks ago by Pjotr Prins
- GN1 metadata
issue opened 7 weeks ago by Pjotr Prins; 0 of 3 tasks done
- Genotype Metadata
issue opened on Nov 29 2022 by Munyoki Kilyungi
- issues/sorting-correlation-nan-vals.gmi
issue opened on Nov 28 2022 by AlexanderKabui
- Correlations: Returning Fewer Results
issue opened on Nov 07 2022 by AlexanderKabui, last updated on Nov 25 2022 by Zachary Sloan
- Decouple Tasks in Correlations Results Display
issue opened on Oct 24 2022 by Frederick Muriuki Muriithi, last updated on Nov 25 2022 by Frederick Muriuki Muriithi
- Correlations: Fewer Results than Expected
issue opened on Nov 22 2022 by Frederick Muriuki Muriithi
- Trait Page Errors on CD
issue opened on Nov 22 2022 by Frederick Muriuki Muriithi
- Correlations are not including f1 parents
issue opened on Nov 07 2022 by AlexanderKabui, last updated on Nov 22 2022 by Frederick Muriuki Muriithi
- Correlations timing out for "UMUTAffy Hippocampus Exon (Feb09) RMA" correlations (and probably some others)
issue opened on Oct 17 2022 by Zachary Sloan, last updated on Nov 22 2022 by Frederick Muriuki Muriithi
- Remove externally loaded JS
issue opened on Apr 18 2022 by BonfaceKilz, last updated on Nov 21 2022 by AlexanderKabui
- Long samplenames overflow in Haplotype Analyst
issue opened on Nov 11 2022 by Zachary Sloan
- Global search doesn't seem to return phenotype traits
issue opened on Nov 11 2022 by Zachary Sloan
- Editing traits for BXDs is failing for "%" substitution
issue opened on Nov 09 2022 by Munyoki Kilyungi, last updated on Nov 09 2022 by Munyoki Kilyungi
- Errors, defects and missing data in the database
issue opened on Oct 27 2022 by Arun Isaac, last updated on Oct 30 2022 by Arun Isaac
- Full text search
issue opened on Jun 30 2022 by Arun Isaac, last updated on Oct 27 2022 by Arun Isaac; 0 of 1 tasks done
- Pre-Cache Datasets
issue opened on Oct 24 2022 by Frederick Muriuki Muriithi
- Genotype correlations only returning results from first chromosome
issue opened on Oct 21 2022 by Zachary Sloan
- Database Migrations
issue opened on Oct 19 2022 by Frederick Muriuki Muriithi
- Add mouse data-set
issue opened on Jun 30 2022 by BonfaceKilz, last updated on Oct 12 2022 by Munyoki Kilyungi; 0 of 4 tasks done
- Editing Metadata [Improvements to Make]
issue opened on Mar 31 2022 by BonfaceKilz, last updated on Oct 12 2022 by Munyoki Kilyungi; 7 of 11 tasks done
- Document redis data
issue opened on Nov 27 2021 by BonfaceKilz, last updated on Oct 12 2022 by Munyoki Kilyungi
- Rework Fetching Settings
issue opened on Sep 25 2022 by Munyoki Kilyungi, last updated on Oct 12 2022 by Munyoki Kilyungi
- Search results for SNP looks weird
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi
- Cannot Edit Metadata of BXD Traits Effectively
issue opened on Apr 28 2022 by BonfaceKilz, last updated on Oct 12 2022 by Munyoki Kilyungi; 10 of 12 tasks done
- Fix Case Attribute Work (Consecutive CRUD applications)
issue opened on Apr 06 2022 by BonfaceKilz, last updated on Oct 12 2022 by Munyoki Kilyungi; 0 of 2 tasks done
- Error when fetching SNPs in a search page
issue opened on Sep 28 2022 by Munyoki Kilyungi, last updated on Oct 12 2022 by Munyoki Kilyungi
- Case Attribute Editing Problems
issue opened on May 02 2022 by Zachary Sloan, last updated on Oct 12 2022 by Munyoki Kilyungi
- Handle Configuration Files
issue opened on Dec 03 2021 by BonfaceKilz, last updated on Oct 12 2022 by Munyoki Kilyungi
- Integrate Feed Analyser
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi
- Using guix-bioinformatics in a channels.scm file
issue opened on Aug 15 2021 by Efraim Flashner, last updated on Oct 09 2022 by Pjotr Prins
- Terminal output to the browser
issue opened on Oct 28 2021 by jgart, last updated on Oct 07 2022 by Arun Isaac
- Rebooting the GN production machine(s)
issue opened on Jan 01 2022 by Pjotr Prins, last updated on Oct 06 2022 by Pjotr Prins; 4 of 4 tasks done
- Decommission machines
issue opened on Oct 06 2021 by Pjotr Prins, last updated on Oct 05 2022 by Pjotr Prins; 11 of 22 tasks done
- Fix Missing Genotype Files for GEMMA
issue opened on Sep 13 2022 by Frederick Muriuki Muriithi, last updated on Sep 20 2022 by Frederick Muriuki Muriithi; 1 of 3 tasks done
- Missing Python Module(s) for GeneNetwork3
issue opened on Sep 19 2022 by Frederick Muriuki Muriithi
- Annotation
issue opened on Sep 14 2022 by Pjotr Prins, last updated on Sep 14 2022 by Pjotr Prins; 0 of 5 tasks done
- Add track for showing which regions in mouse/rat correspond to human regions to the mapping figure
issue opened on Jul 21 2022 by Zachary Sloan, last updated on Sep 14 2022 by Pjotr Prins
- Simplify `dataset.py` in GeneNetwork2
issue opened on Sep 13 2022 by Frederick Muriuki Muriithi
- Markdown docs
issue opened on Sep 10 2022 by Pjotr Prins
- tux01 running out of RAM
issue opened on Sep 03 2022 by Pjotr Prins, last updated on Sep 05 2022 by Alexander_Kabui; 1 of 6 tasks done
- Second production on tux02
issue opened on Aug 23 2022 by Arun Isaac, last updated on Sep 05 2022 by Alexander_Kabui
- GN2 Time Machines
issue opened on Aug 19 2022 by Pjotr Prins, last updated on Sep 05 2022 by Alexander_Kabui; 4 of 10 tasks done
- Genewiki conversion
issue opened on Aug 26 2022 by Pjotr Prins, last updated on Sep 05 2022 by Alexander_Kabui; 0 of 3 tasks done
- Enable all DataTables to call the same code
issue opened on Jul 26 2022 by Zachary Sloan, last updated on Jul 27 2022 by Zachary Sloan
- Buggy Use of `urllib.parse.urljoin`
issue opened on Jul 25 2022 by Frederick Muriuki Muriithi
- Allow analyses to be done between traits from "individuals" groups and their corresponding "main" group
issue opened on Jul 21 2022 by Zachary Sloan
- Rewrite qc and qc-uploads in Python3
issue opened on Apr 11 2022 by Frederick Muriuki Muriithi, last updated on Jul 20 2022 by Frederick Muriuki Muriithi
- Use genodb in genenetwork
issue opened on Jul 19 2022 by Arun Isaac
- Add the option to save traits uploaded with the Submit Trait option
issue opened on Jul 19 2022 by Zachary Sloan
- Gn3 network dependency
issue opened on Mar 18 2022 by Alexander Kabui, last updated on Jul 08 2022 by Alexander_Kabui
- MariaDB: Move to InnoDB Engine
issue opened on Dec 28 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 0 of 2 tasks done
- Clean Up
issue opened on Jan 02 2022 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac
- ProbeSetXRef
issue opened on Dec 29 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac
- ProbeSetData
issue opened on Dec 31 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 6 of 13 tasks done
- ProbeSE
issue opened on Dec 30 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac
- ProbeData
issue opened on Dec 30 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac
- Sheepdog
issue opened on Nov 08 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 3 of 17 tasks done
- Machine room
issue opened on Nov 23 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 1 of 4 tasks done
- GN1 Time machines
issue opened on Oct 07 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac
- Fallbacks and backups
issue opened on Aug 31 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 19 of 24 tasks done
- Public inbox
issue opened on Jun 29 2022 by Arun Isaac
- Scree Plot appears to be incorrect
issue opened on May 19 2022 by Zachary Sloan, last updated on Jun 15 2022 by BonfaceKilz
- Uninformative error when batch submitting unknown strains
issue opened on May 05 2022 by BonfaceKilz
- Effect size for GEMMA is a MUST
issue opened on Apr 18 2022 by Rob Williams, last updated on Apr 29 2022 by Arun Isaac
- Make Partial Correlations Table Searchable
issue opened on Apr 22 2022 by Frederick Muriuki Muriithi
- Create a new UI language for gn2
issue opened on Apr 18 2022 by BonfaceKilz
- Cool Interfaces We Should Emulate
issue opened on Apr 13 2022 by BonfaceKilz, last updated on Apr 14 2022 by BonfaceKilz
- Zoomed mapping result are empty for certain traits
issue opened on Apr 11 2022 by Zachary Sloan, last updated on Apr 13 2022 by Zachary Sloan
- Adding principal component to collection returns an error
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 07 2022 by Alexander Kabui
- Error when attempt to zoom to a chromosome after mapping a PCA trait
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Multi-trait heat map failed
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Unable to open new tab for mapping/ correlations with Chrome
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Slow query
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Add search, select and export to datatables table
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Capture state of phenotypes in a HASH
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Fetch trait names for phenotypes
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
- Variant Browser seems to be using mm9
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
- csv export meta data are not commented out
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
- Each shepherd service needs its own guix profile.
issue opened on Nov 03 2021 by Efraim Flashner, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- GN1 symbols
issue opened on Nov 23 2021 by Pjotr Prins, last updated on Mar 16 2022 by Frederick Muriuki Muriithi; 0 of 2 tasks done
- Proxy has hard coded URLs
issue opened on Oct 22 2021 by Pjotr Prins, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Arthur mentioned last meet that GeneNetwork2 does not redirect http urls to https.
issue opened on Dec 05 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Need Guix packages
issue opened on Mar 12 2022 by Pjotr Prins, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Document API endpoints for GeneNetwork3
issue opened on Mar 04 2022 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Databases Getting Out of Wack
issue opened on Mar 03 2022 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Large datasets crash gemma
issue opened on Mar 12 2022 by Pjotr Prins, last updated on Mar 16 2022 by Frederick Muriuki Muriithi; 0 of 7 tasks done
- Guix: Using guix shell with root file
issue opened on Jan 27 2022 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Return canned text if notebook description returns none
issue opened on Oct 28 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- R Kernel Dying
issue opened on Jan 17 2022 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Integrate styling of app with GN2
issue opened on Oct 28 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- When binderlite finds an unkown package in a guix manifest
issue opened on Oct 01 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Add Regular Expression to Prevent Invalid Input
issue opened on Oct 01 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Add configuration to set server name
issue opened on Nov 10 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Tux01 hard disk crash
issue opened on Sep 29 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- GN1 Slowness
issue opened on Sep 15 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- GN1 Production
issue opened on Sep 15 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi; 3 of 8 tasks done
- Fix GN1 Network Graph
issue opened on Sep 15 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- Marker covariates implemented wrong in rqtl_wrapper.R
issue opened on Sep 22 2021 by Zachary Sloan, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- genecup is currently running as root on penguin2.
issue opened on Aug 15 2021 by Efraim Flashner, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- Multivariate GEMMA hangs (issue 243)
issue opened on Aug 16 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- Medaka Inbred Kiyosu-Karlsruhe (MIKK) Panel
issue opened on Sep 22 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- Show Template for when Git URL is not Found
issue opened on Sep 28 2021 by jgart, last updated on Mar 14 2022 by Frederick Muriuki Muriithi