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Fix Pairscan Mapping

Tags

  • assigned: alexm,
  • priority: medium,
  • type: bug
  • keywords: pairscan, debug, fix, mapping

Description

Pairscan mapping is currently not working:

Error:

GeneNetwork 3.12-rc1  https://genenetwork.org/run_mapping ( 1:01PM UTC Jan 13, 2025) 
Traceback (most recent call last):
  File "/gnu/store/cxawl32jm0fgavc9ahcr3g0j66zdan30-profile/lib/python3.10/site-packages/flask/app.py", line 1523, in full_dispatch_request
    rv = self.dispatch_request()
  File "/gnu/store/cxawl32jm0fgavc9ahcr3g0j66zdan30-profile/lib/python3.10/site-packages/flask/app.py", line 1509, in dispatch_request
    return self.ensure_sync(self.view_functions[rule.endpoint])(**req.view_args)
  File "/gnu/store/cxawl32jm0fgavc9ahcr3g0j66zdan30-profile/lib/python3.10/site-packages/gn2/wqflask/views.py", line 1035, in mapping_results_page
    template_vars = run_mapping.RunMapping(start_vars,
  File "/gnu/store/cxawl32jm0fgavc9ahcr3g0j66zdan30-profile/lib/python3.10/site-packages/gn2/wqflask/marker_regression/run_mapping.py", line 312, in __init__
    self.geno_db_exists = geno_db_exists(self.dataset, results[0]['name'])
    KeyError: 'name'

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