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Variant Browser seems to be using mm9


  • assigned:
  • priority: unclear
  • type: bug
  • status: stalled
  • keywords: variant browser, mm9, from github


  • acenteno
  • robw
  • pjotrp


When looking for SNPs in GN2, the gene annotations (and, I think, the SNPs) of the results do not match the query. Searching for a gene gives correct coordinates in the search box at http://www.genenetwork.org/snp_browser, but the results are for the same coordinates in mm9 (see screenshot).

The example is for a search for 'Snx6' (chr12 54.746356 - 54.795662).

(made with skribilo)