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Broken Collections Features

Tags

  • type: bug
  • status: open
  • priority: high
  • assigned: zachs, fredm
  • keywords: gn2, genenetwork2, genenetwork 2, collections

Descriptions

There are some features in the search results page, and/or the collections page that are broken — these are:

  • "CTL" feature
  • "MultiMap" feature
  • "Partial Correlations" feature
  • "Generate Heatmap" feature

Reproduce Issue

  • Go to https://genenetwork.org
  • Select "Mouse (Mus musculus, mm10) for "Species"
  • Select "BXD Family" for "Group"
  • Select "Traits and Cofactors" for "Type"
  • Select "BXD Published Phenotypes" for "Dataset"
  • Type "locomotion" in the "Get Any" field (without the quotes)
  • Click "Search"
  • In the results page, select the traits with the following "Record" values: "BXD_10050", "BXD_10051", "BXD_10088", "BXD_10091", "BXD_10092", "BXD_10455", "BXD_10569", "BXD_10570", "BXD_11316", "BXD_11317"
  • Click the "Add" button and add them to a new collection
  • In the resulting collections page, click the button for any of the listed failing features above

Failure modes

  • The "CTL" and "WCGNA" features have a failure mode that might have been caused by recent changes making use of AJAX calls, rather than submitting the form manually.
  • The "MultiMap" and "Generate Heatmap" features raise exceptions that need to be investigated and resolved
  • The "Partial Correlations" feature seems to run forever

Break-out Issues

We break-out the issues above into separate pages to track the progress of the fixes for each feature separately.

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