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Parsing genotyfiles
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assigned: alexm
type: debug
priority: high
status: in progress
Once you identify the genofile identify
the file in the GENOTYPE_FILES and extract sample_listx
for entire parsing code refer to:
https://github.com/genenetwork/genenetwork3/blob/main/gn3/db/genotypes.py
Linked to issue
https://issues.genenetwork.org/issues/linking_genotype-files-to-datasets
(made with
skribilo
)