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Delete Phenotypes

Tags

  • assigned: fredm
  • status: open
  • priority: high
  • type: feature-request, feature request
  • keywords: uploader, gn-uploader, delete phenotypes, phenotypes

Description

On 20th January 2026, @acenteno requested a "Delete Phenotypes" feature on the uploader that allows one to delete phenotypes they have previously uploaded.

Details for the task

The script @acenteno was using to delete phenotypes can be found at "space:/mount/space2/lily-clone/gnshare/gn/web/webqtl/maintainance/dataset/delete_phenotypes.py"

An example of a "config.ini" file that could be provided to the script to delete phenotypes is:

[config]
inbredsetid = 1
datafile = datasampledir/delete_phenotypes/sample_data1.txt

An example of the data in a datafile specified in the "config.ini" above would be:

Record
15175
15955
15655
15670
13057
13058

These would be the PublishXRef values that link the phenotypes to their data.

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