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Indicating Heterozygosity

Tags

  • status: ongoing
  • assigned: fredm, zachs, acenteno
  • type: documentation
  • priority: medium
  • keywords: doc, documentation, heterozygous, hererozygosity

Description

For GeneNetwork, we indicate the the allele values in one of two formats:

|--------------|----------|----------|
| Source       | Format 1 | Format 2 |
|--------------|----------|----------|
| Founder      | 0        | 0        |
| Heterozygous | 1        | 0.5      |
| Other        | 2        | 1        |
|--------------|----------|----------|

Values outside of these are considered an error.

These values are stored in the GenoCode table.

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