• assigned: fredm
• priority: medium
• keywords: gn-uploader, uploader, data, datasets
• status: closed, completed
• type: bug

This is likely caused by the script finding a ".geno" file, but the file is either missing some samples, or is corrupted in some way.

• Line 119

handles missing samples in the '.geno' file, so that is not the cause of the failure.

The following commits should fix the issue:

• https://git.genenetwork.org/gn-uploader/commit/?id=4dcf6eef6e0bc97ec1aac6aad2a1548e5f79c651a
• https://git.genenetwork.org/gn-uploader/commit/?id=90809ed28ac6d07f20f533f8a0108d3557cc1bc4
• https://git.genenetwork.org/gn-uploader/commit/?id=c4c2ed8ba205be09c6040a07444b0d892cae8a31