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Genome Details

This file is probably misnamed.

*TODO*: Update name once we know where this fits

Tags

  • type: documentation, doc, docs
  • assigned: fredm
  • priority: docs
  • status: open
  • keywords: gn-uploader, uploader, genome

Location

centiMorgan (cM)

We no longer use centiMorgan in GeneNetwork

From the email threads:

> …
> Sorry, we now generally do not use centimorgans. Chr 19 is 57 cM
> using markers that exclude telomeres in most crosses.
> …

and

> …
> I know that cM is a bit more variable because it's not a direct measurement, …
> …

Megabasepairs (Mbp)

The uploader will store any provided physical location values (in megabasepairs) in the

specifically in the `Mb` field of that table.

(made with skribilo)