- Pin Channel Commits; Decouple from Guix
issue opened 11 hours ago by Frederick Muriuki Muriithi, last updated 10 hours ago by Frederick Muriuki Muriithi; 4 of 5 tasks done
- mechanical-rob: Add Partial Correlations Tests
issue opened 5 days ago by Frederick Muriuki Muriithi
- Query Bug: DatabaseError
issue opened 8 days ago by Frederick Muriuki Muriithi
- guix-bioinformatics: Remove `guix-rust-past-crates` channel
issue opened 8 days ago by Frederick Muriuki Muriithi
- Export Uploaded Data to LMDB and RDF Stores
issue opened on Nov 03 2023 by Frederick Muriuki Muriithi, last updated 2 weeks ago by Frederick Muriuki Muriithi; 0 of 6 tasks done
- Apps
issue opened on Nov 19 2024 by Pjotr Prins, last updated 4 weeks ago by Pjotr Prins; 33 of 74 tasks done
- Broken Aliases
issue opened on Oct 21 2024 by Frederick Muriuki Muriithi, last updated on Aug 15 2025 by Frederick Muriuki Muriithi; 3 of 4 tasks done
- CD is slow
issue opened on Jul 20 2025 by Pjotr Prins, last updated on Jul 24 2025 by Pjotr Prins; 2 of 8 tasks done
- Tux02 Production
issue opened on Oct 07 2021 by Pjotr Prins, last updated on Jun 13 2025 by Pjotr Prins; 17 of 22 tasks done
- Generate Heatmaps Failing
issue opened on Oct 15 2024 by Frederick Muriuki Muriithi, last updated on Apr 08 2025 by Frederick Muriuki Muriithi
- Broken Collections Features
issue opened on Apr 07 2025 by Frederick Muriuki Muriithi, last updated on Apr 08 2025 by Frederick Muriuki Muriithi
- CTL Maps Error
issue opened on Apr 08 2025 by Frederick Muriuki Muriithi, last updated on Apr 08 2025 by Frederick Muriuki Muriithi
- Replace Redis with SQL
issue opened on Mar 12 2025 by Frederick Muriuki Muriithi
- Penguin2 RAID 5
issue opened on Feb 28 2025 by Pjotr Prins
- Rework Hard Dependence on Github
issue opened on Feb 14 2025 by Frederick Muriuki Muriithi, last updated on Feb 14 2025 by Frederick Muriuki Muriithi
- Rendering Images Linked in Markdown Documents
issue opened on Feb 11 2025 by Frederick Muriuki Muriithi
- Investigate and Fix `rm` Command in `rqtl` Logs
issue opened on Jan 08 2025 by Alexander_Kabui, last updated on Jan 09 2025 by Munyoki Kilyungi; 4 of 6 tasks done
- Fix Broken Global Search UI
issue opened on Jan 07 2025 by Alexander_Kabui, last updated on Jan 07 2025 by Alexander_Kabui; 0 of 2 tasks done
- gn-guile Configurations
issue opened on Nov 18 2024 by Frederick Muriuki Muriithi; 1 of 1 tasks done
- UM-HET3 Timing: Slow
issue opened on Oct 26 2024 by Frederick Muriuki Muriithi, last updated on Oct 26 2024 by Frederick Muriuki Muriithi
- Check for Mandatory Settings
issue opened on Oct 18 2024 by Frederick Muriuki Muriithi; 0 of 3 tasks done
- Redirect Users to the Correct URL on Login for GN2
✓ issue opened on Sep 17 2024 by Alexander_Kabui, last updated on Oct 16 2024 by Alexander_Kabui; 2 of 2 tasks done
- Uploading Samples
issue opened on Sep 18 2024 by Frederick Muriuki Muriithi, last updated on Sep 19 2024 by Frederick Muriuki Muriithi
- New Privileges: Samples Ordering
issue opened on Sep 19 2024 by Frederick Muriuki Muriithi
- Feature Request: Create Test Accounts
issue opened on Sep 16 2024 by Frederick Muriuki Muriithi, last updated on Sep 17 2024 by Frederick Muriuki Muriithi
- GN2 Integration with LLM search using cached results
issue opened on Aug 26 2024 by John Nduli, last updated on Sep 09 2024 by Alexander_Kabui; 2 of 6 tasks done
- Add Case Attributes to RDF
issue opened on Sep 03 2024 by Munyoki Kilyungi
- GN Markdown Editor Integration
issue opened on Jun 07 2024 by Alexander_Kabui, last updated on Aug 22 2024 by Alexander_Kabui; 9 of 10 tasks done
- Move Search to Xapian
✓ issue opened on Sep 08 2023 by Munyoki Kilyungi, last updated on Jul 29 2024 by Munyoki Kilyungi
- Rating System: No Indication for Login Requirement
issue opened on Jul 24 2024 by Solomon Shelby
- Fallbacks and backups
issue opened on Aug 31 2021 by Pjotr Prins, last updated on Jun 28 2024 by Pjotr Prins; 3 of 25 tasks done
- Each shepherd service needs its own guix profile.
issue opened on Nov 03 2021 by Efraim Flashner, last updated on Jun 21 2024 by Pjotr Prins
- ProbeSet not Applicable to All Data
issue opened on Jun 20 2024 by Frederick Muriuki Muriithi
- Fallback issues
issue opened on Mar 22 2024 by Pjotr Prins, last updated on Apr 05 2024 by Pjotr Prins; 3 of 6 tasks done
- Database: `ProbeSetSE` Schema Bug
issue opened on Mar 22 2024 by Frederick Muriuki Muriithi, last updated on Mar 22 2024 by Frederick Muriuki Muriithi
- AI UI Enhancements
issue opened on Mar 01 2024 by Pjotr Prins; 0 of 3 tasks done
- Prevent Weak Passwords
issue opened on Feb 27 2024 by Frederick Muriuki Muriithi
- Handle "too-many-password-attempts"
issue opened on Feb 27 2024 by Frederick Muriuki Muriithi
- Troubleshoot response inconsistencies for GN-llm
issue opened on Jan 10 2024 by Alexander_Kabui
- Octopus sysmaintenance
issue opened on Oct 12 2021 by Pjotr Prins, last updated on Oct 31 2023 by Pjotr Prins; 0 of 8 tasks done
- Bug with linking data
issue opened on Jul 26 2023 by Zachary Sloan, last updated on Oct 19 2023 by Frederick Muriuki Muriithi
- Temporary Traits Access Concerns
issue opened on Aug 03 2023 by Frederick Muriuki Muriithi
- Brittle Fix for Editing Metadata
issue opened on Aug 02 2023 by Frederick Muriuki Muriithi
- Paginate Resources Page
issue opened on Jul 27 2023 by Frederick Muriuki Muriithi
- UI issues/improvements
issue opened on Jul 26 2023 by Zachary Sloan
- Show Last Edited
issue opened on Jul 24 2023 by Frederick Muriuki Muriithi
- Fetch trait data using genofiles
issue opened on Jul 11 2023 by Alexander_Kabui, last updated on Jul 13 2023 by Alexander_Kabui; 2 of 3 tasks done
- Parsing genotyfiles
issue opened on Jul 11 2023 by Alexander_Kabui
- Linking genotype files to datasets
issue opened on Jul 07 2023 by Alexander_Kabui, last updated on Jul 11 2023 by Alexander_Kabui
- Letsencrypt
issue opened on Oct 13 2021 by Pjotr Prins, last updated on Jul 04 2023 by Pjotr Prins; 2 of 5 tasks done
- Branding and front-end-services
issue opened on Jun 14 2023 by Pjotr Prins; 0 of 1 tasks done
- Slow query
issue opened on May 27 2023 by Pjotr Prins, last updated on May 29 2023 by Pjotr Prins; 0 of 2 tasks done
- Unable to open new tab for mapping/ correlations with Chrome
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 18 2023 by Munyoki Kilyungi
- Search results presentation
issue opened on Apr 04 2023 by Alexander_Kabui
- Report invalid search queries passed to the search API
issue opened on Feb 15 2023 by Arun Isaac, last updated on Apr 04 2023 by Alexander_Kabui
- Annotation
issue opened on Sep 14 2022 by Pjotr Prins, last updated on Mar 14 2023 by Arun Isaac; 0 of 5 tasks done
- sample data caching bug
issue opened on Feb 11 2022 by Zachary Sloan, last updated on Mar 14 2023 by Arun Isaac
- GN1 annotation page broken
issue opened on Dec 23 2022 by Pjotr Prins
- GN1 github problem
issue opened on Dec 17 2022 by Pjotr Prins
- GN1 annotation page broken
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Dec 17 2022 by Pjotr Prins; 0 of 2 tasks done
- Annotate traits page with metadata from RDF
✓ issue opened on Sep 30 2022 by Munyoki Kilyungi, last updated on Dec 15 2022 by Munyoki Kilyungi; 16 of 16 tasks done
- Correlations: Fewer Results than Expected
issue opened on Nov 22 2022 by Frederick Muriuki Muriithi
- Pre-Cache Datasets
issue opened on Oct 24 2022 by Frederick Muriuki Muriithi
- Global search does not close connections properly (and is slow)
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 14 2022 by Arun Isaac
- Automatically find broken links on GN2
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi; 2 of 2 tasks done
- Search results for SNP looks weird
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi
- Capture Data on the BXDs in RDF
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi
- Using guix-bioinformatics in a channels.scm file
issue opened on Aug 15 2021 by Efraim Flashner, last updated on Oct 09 2022 by Pjotr Prins
- 'TempDataSet' object has no attribute 'query_for_group' (error)
✓ issue opened on Mar 22 2022 by Frederick Muriuki Muriithi, last updated on Sep 28 2022 by Alexander_Kabui
- Missing Python Module(s) for GeneNetwork3
issue opened on Sep 19 2022 by Frederick Muriuki Muriithi
- Add track for showing which regions in mouse/rat correspond to human regions to the mapping figure
issue opened on Jul 21 2022 by Zachary Sloan, last updated on Sep 14 2022 by Pjotr Prins
- GN2 Time Machines
issue opened on Aug 19 2022 by Pjotr Prins, last updated on Sep 05 2022 by Alexander_Kabui; 4 of 10 tasks done
- Enable all DataTables to call the same code
issue opened on Jul 26 2022 by Zachary Sloan, last updated on Jul 27 2022 by Zachary Sloan
- Allow analyses to be done between traits from "individuals" groups and their corresponding "main" group
issue opened on Jul 21 2022 by Zachary Sloan
- Add the option to save traits uploaded with the Submit Trait option
issue opened on Jul 19 2022 by Zachary Sloan
- Sheepdog
issue opened on Nov 08 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 3 of 17 tasks done
- Add an 'Edit Issue' Link to Tissue
✓ issue opened on Mar 24 2022 by Frederick Muriuki Muriithi, last updated on Apr 15 2022 by Arun Isaac
- Zoomed mapping result are empty for certain traits
issue opened on Apr 11 2022 by Zachary Sloan, last updated on Apr 13 2022 by Zachary Sloan
- correlation error: 'NoneType' object is not iterable
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 13 2022 by Alexander Kabui
- Wrong CSV in ITP_10001 longevity dataset
✓ issue opened on Apr 11 2022 by BonfaceKilz, last updated on Apr 12 2022 by BonfaceKilz
- BXD102xBXD077F1 Error
✓ issue opened on Mar 22 2022 by Frederick Muriuki Muriithi, last updated on Apr 07 2022 by Zachary Sloan
- Adding principal component to collection returns an error
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 07 2022 by Alexander Kabui
- Error when attempt to zoom to a chromosome after mapping a PCA trait
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Multi-trait heat map failed
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Slow query
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Capture state of phenotypes in a HASH
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
- Fetch trait names for phenotypes
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
- Variant Browser seems to be using mm9
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
- csv export meta data are not commented out
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
- Return canned text if notebook description returns none
issue opened on Oct 28 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Integrate styling of app with GN2
issue opened on Oct 28 2021 by jgart, last updated on Mar 16 2022 by Frederick Muriuki Muriithi
- Tux01 hard disk crash
issue opened on Sep 29 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- GN1 Production
issue opened on Sep 15 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi; 3 of 8 tasks done
- Fix GN1 Network Graph
issue opened on Sep 15 2021 by Pjotr Prins, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- Marker covariates implemented wrong in rqtl_wrapper.R
issue opened on Sep 22 2021 by Zachary Sloan, last updated on Mar 14 2022 by Frederick Muriuki Muriithi
- Designing an issue tracker on gemini
✓ issue opened on Jul 25 2021 by Pjotr Prins, last updated on Feb 02 2022 by Pjotr Prins