tissue issue tracker

Dump sample data to LMDB
- lmdb
- rdf
- stalled
- high
issue opened on Dec 15 2022 by Munyoki Kilyungi, last updated on Mar 06 2024 by Munyoki Kilyungi; 0 of 5 tasks done
Add Sample Size to RDF
- rdf
- metadata
- stalled
- high
issue opened on Dec 15 2022 by Munyoki Kilyungi, last updated on Mar 06 2024 by Munyoki Kilyungi
Improve Logging in GN3 RDF endpoints
- rdf
- gn3
- api
- high
✓ issue opened on Feb 10 2024 by Munyoki Kilyungi, last updated on Feb 14 2024 by Munyoki Kilyungi
Add GeneList to Metadata
- virtuoso
- rdf
- high
✓ issue opened on Dec 13 2023 by Munyoki Kilyungi, last updated on Dec 20 2023 by Munyoki Kilyungi
Handling Resource Links in ProbeSet Page
- virtuoso
- rdf
- high
✓ issue opened on Nov 22 2023 by Munyoki Kilyungi, last updated on Dec 14 2023 by Munyoki Kilyungi
Model Menu In RDF
- rdf
- high
- modelling
✓ issue opened on Apr 18 2023 by Munyoki Kilyungi, last updated on Oct 11 2023 by Munyoki Kilyungi
Incorrect PubMed IDs in the Publication Table
- rdf
- sql
- high
✓ issue opened on May 09 2023 by Munyoki Kilyungi, last updated on Oct 11 2023 by Munyoki Kilyungi
Improve sparql results
- rdf
- sparql
- high
- improvement
✓ issue opened on Jul 07 2023 by Munyoki Kilyungi, last updated on Oct 11 2023 by Munyoki Kilyungi
Autogenerate documentation: trees, and labels
- rdf
- gnsoc2023
- high
- feature
- nextgendatabases
✓ issue opened on Jun 23 2023 by Munyoki Kilyungi, last updated on Oct 11 2023 by Munyoki Kilyungi
Slow query
- slow query
- in progress
- medium
issue opened on May 27 2023 by Pjotr Prins, last updated on May 29 2023 by Pjotr Prins; 0 of 2 tasks done
Give Examples of Fetching GeneRIF Metadata in Sparql
- generif
- metadata
- rdf
- documentation
✓ issue opened on Apr 04 2023 by Munyoki Kilyungi, last updated on May 18 2023 by Munyoki Kilyungi
Upload GeneWiki RDF metadata to CD
- generif
- metadata
- rdf
✓ issue opened on Apr 17 2023 by Munyoki Kilyungi, last updated on Apr 18 2023 by Munyoki Kilyungi
Add GeneRIF page
- generif
- metadata
- rdf
- feature
✓ issue opened on Apr 14 2023 by Munyoki Kilyungi, last updated on Apr 18 2023 by Munyoki Kilyungi
Unable to open new tab for mapping/ correlations with Chrome
- mapping
- correlation
- google chrome
- ui
- from github
- medium
- unclear
- bug
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 18 2023 by Munyoki Kilyungi
Dump GeneWiki Metadata
- metadata
- rdf
- feature
✓ issue opened on Mar 16 2023 by Munyoki Kilyungi, last updated on Apr 04 2023 by Munyoki Kilyungi
GN1 annotation page broken
- gn1
- genenetwork1
- annotation
- from github
- bug
- overdue
- high
issue opened on Dec 23 2022 by Pjotr Prins
GN1 annotation page broken
- gn1
- genenetwork1
- annotation
- from github
- bug
- testing
- high
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Dec 17 2022 by Pjotr Prins; 0 of 2 tasks done
Annotate traits page with metadata from RDF
- rdf
- critical
- metadata
- in progress
- high
✓ issue opened on Sep 30 2022 by Munyoki Kilyungi, last updated on Dec 15 2022 by Munyoki Kilyungi; 16 of 16 tasks done
Global search does not close connections properly (and is slow)
- global search
- db connections
- medium priority
- from github
- stalled
- medium
- bug
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 14 2022 by Arun Isaac
Automatically find broken links on GN2
- gn1
- gn2
- broken links
- from github
- completed
- medium
- bug
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi; 2 of 2 tasks done
Search results for SNP looks weird
- ui
- snp
- from github
- in progress
- medium
- bug
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi
Capture Data on the BXDs in RDF
- rdf
- bxd
- rest
- from github
- high priority
- feature-request
- enhancement
- unclear
- high
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Oct 12 2022 by Munyoki Kilyungi
'TempDataSet' object has no attribute 'query_for_group' (error)
- tempdataset
- from github
- bug
- high
✓ issue opened on Mar 22 2022 by Frederick Muriuki Muriithi, last updated on Sep 28 2022 by Alexander_Kabui
correlation error: 'NoneType' object is not iterable
- correlations
- from github
- high priority
- completed
- high
- bug
✓ issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 13 2022 by Alexander Kabui
BXD102xBXD077F1 Error
- correlations
- from github
- unclear
- critical
- bug
✓ issue opened on Mar 22 2022 by Frederick Muriuki Muriithi, last updated on Apr 07 2022 by Zachary Sloan
Adding principal component to collection returns an error
- collections
- from github
- bug
- high
- unclear
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi, last updated on Apr 07 2022 by Alexander Kabui
Error when attempt to zoom to a chromosome after mapping a PCA trait
- pca
- from github
- high priority
- unclear
- high
- bug
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
Multi-trait heat map failed
- heatmap
- from github
- stalled
- medium
- bug
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
Slow query
- slow query
- from github
- stalled
- high
issue opened on Mar 23 2022 by Frederick Muriuki Muriithi
Fetch trait names for phenotypes
- phenotype
- from github
- feature-request
- enhancement
- unclear
- pending
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
Variant Browser seems to be using mm9
- variant browser
- mm9
- from github
- stalled
- bug
- unclear
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi
csv export meta data are not commented out
- csv
- from github
- meta data
- unclear
- bug
- high
issue opened on Mar 22 2022 by Frederick Muriuki Muriithi