- Temporary Traits Access Concerns
issue opened on Aug 03 2023 by Frederick Muriuki Muriithi
Temporary Traits Access Concerns
## Tags
* type: feature request
* priority: medium
* status: open
* assigned: fredm, zachs
* keywords: temp traits, temporary traits, access control
## Description...
- Quality Control of Data in Uploaded R/qtl2 Bundles
✓ issue opened on Feb 02 2024 by Frederick Muriuki Muriithi, last updated on Sep 16 2024 by Frederick Muriuki Muriithi; 10 of 15 tasks done
...Control File
* [x] MUST exist in bundle
* [x] One and only one control file in the bundle
* [x] Defaults for control data are auto-provided by code
* [x] Every file listed in control file MUST exist...
- Link Authentication/Authorisation
issue opened on Jun 24 2024 by Frederick Muriuki Muriithi
...their data, they need access to it. The auth system, by default, will deny anyone/everyone access to any data that is not linked to a resource and which no user has any roles allowing them access...
- Clean up Authorisation
✓ issue opened on Nov 19 2021 by BonfaceKilz, last updated on Dec 04 2023 by Frederick Muriuki Muriithi; 4 of 4 tasks done
...gave the decorator access to them with request.form,
they didn't match the variable names it expected). So I'm not
really sure how best to fix this; I'm guessing that either the >
trait/update...
- Migrate User Accounts from Redis to new Auth DB
✓ issue opened on Dec 22 2022 by Frederick Muriuki Muriithi, last updated on May 22 2023 by Frederick Muriuki Muriithi
...issue was deemed unnecessary.
Users will have to register anew and their access details reconfirmed.
--------------------
Currently, on GN2, user details are stored in Redis. We need to migrate these...
- Build Registration Page for OAuth2 Clients
✓ issue opened on Dec 22 2022 by Frederick Muriuki Muriithi, last updated on May 30 2023 by Frederick Muriuki Muriithi
...OAuth2 clients that users can use to access the GN3 service with the new auth system.
Fixed with commits
=> https://github.com/genenetwork/genenetwork3/commit/25c6da03e1639895f0051e8be6502762beefde0b...
- Sort by Attributes
✓ issue opened on May 31 2024 by Frederick Muriuki Muriithi, last updated on May 31 2024 by Zachary Sloan
...js were moved into table_functions.js so they could be used by more pages.
In this case, the trait page needed access so that the case attribute columns could be sorted such that NA/NULL value
are...
- Rework Resources
✓ issue opened on Sep 06 2023 by Frederick Muriuki Muriithi, last updated on Feb 27 2024 by Frederick Muriuki Muriithi; 2 of 3 tasks done
...2024-02-27
The resource system was updated a while ago.
We still do not view users as resources for the time being, and handle them slightly different from the rest of the system, controlling access...