tissue issue tracker

✓ issue opened on Jul 25 2021 by Pjotr Prins, last updated on Feb 02 2022 by Pjotr Prins

...help wanted
* closed
the keyword statement may have aliases, such as tag and kanban. To undo a keyword simply remove them from the file.
Can't think of anything more to add to make it really useful...

Sheepdog

issue opened on Nov 08 2021 by Pjotr Prins, last updated on Jul 01 2022 by Arun Isaac; 3 of 17 tasks done

...exists)
* [ ] synchronize between queues using a dump
* [ ] sheepdog_expect.rb - expect PINGs
* [ ] sheepdog_rsync.rb - test for 'total size is 0'
* [ ] sheepdog_list tag and filter switches improve...

GN1 github problem

issue opened on Dec 17 2022 by Pjotr Prins

...rm --cached --ignore-unmatch \
MouseTissuesRWWMay08.xls' --prune-empty --tag-name-filter cat -- --all
git reflog expire --expire=now --all && git gc --prune=now --aggressive
```
Note this rewrites...

Add track for showing which regions in mouse/rat correspond to human regions to the mapping figure

issue opened on Jul 21 2022 by Zachary Sloan, last updated on Sep 14 2022 by Pjotr Prins

...explanation about their format are below:
- Help file: https://genome.ucsc.edu/goldenPath/help/chain.html
- Mouse reference: http://hgdownload.cse.ucsc.edu/goldenpath/mm10/liftOver/
- Human reference...

CD is slow

issue opened 11 days ago by Pjotr Prins, last updated 7 days ago by Pjotr Prins; 2 of 8 tasks done

...Consortium M430v2 (Jun06) PDNN 1457545_at 9530036O11Rik long non-coding RNA, expressed sequence tag (EST) AK035474 with high bladder expression antisense EST 14 Kb upstream of Shh...

Fallback issues

issue opened on Mar 22 2024 by Pjotr Prins, last updated on Apr 05 2024 by Pjotr Prins; 3 of 6 tasks done

...help clarify the missing path or file.
```
File "/export/source/fallback-debug/genenetwork3/gn3/fs_helpers.py", line 21, in assert_paths_exist
raise FileNotFoundError(errno.ENOENT, os.strerror...

GN2 Time Machines

issue opened on Aug 19 2022 by Pjotr Prins, last updated on Sep 05 2022 by Alexander_Kabui; 4 of 10 tasks done

Before starting systemd you may want to make sure the database is running.
```
/usr/local/guix-profiles/mariadb/bin/mariadbd --pid-file=/var/run/mysqld/mariadb.pid --verbose (--help)
```
as root you...