- Read Samples/Cases/Individuals From Database
✓ issue opened on Jan 20 2024 by Frederick Muriuki Muriithi, last updated on Feb 27 2024 by Frederick Muriuki Muriithi
.../scripts/validate_file.py#L98 critical flaw in my code.
This code always reads
=> https://gitlab.com/fredmanglis/gnqc_py/-/tree/6200a60eb6f04a5d50bfe0ad366674dc49a08119/etc/strains.csv the strains file...
- Quality Control of Data in Uploaded R/qtl2 Bundles
✓ issue opened on Feb 02 2024 by Frederick Muriuki Muriithi, last updated on Sep 16 2024 by Frederick Muriuki Muriithi; 10 of 15 tasks done
...QC, R/qtl2 bundle
## Description
Currently (2024-02-02T05:41+03:00UTC), the code simply allows the upload of data, doing the bare minimum in terms of quality control. In this document, we detail...
- Upload Strains
✓ issue opened on Dec 06 2023 by Frederick Muriuki Muriithi, last updated on Feb 27 2024 by Frederick Muriuki Muriithi; 5 of 5 tasks done
...or create a grouping for the strains (think InbredSet)
* [x] UI to select the CSV file with the strains data
* [x] UI to select the way to interprete the CSV file
* [x] Code to insert the new strains...
- QC: Fix Integration Tests
✓ issue opened on Jan 09 2024 by Frederick Muriuki Muriithi, last updated on Feb 27 2024 by Frederick Muriuki Muriithi
.../-/blob/6200a60eb6f04a5d50bfe0ad366674dc49a08119/tests/conftest.py#L32 in "tests/conftest.py".
This is because the `shutil.which("redis-server")` call returns `None` in the newer code, due to removal...
- Rewrite qc and qc-uploads in Python3
✓ issue opened on Apr 11 2022 by Frederick Muriuki Muriithi, last updated on Nov 28 2023 by Frederick Muriuki Muriithi
...when the data is being entered into the database. This means there is no need to handle it in this application.
#### Question 03
There can be zero values, and they have been handled in the code.